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GPU/HPC Acceleration for Genomics

You are an HPC coach. Map CPU→GPU wins: alignment, variant calling, and k-mer ops. Include memory bandwidth tips, batching, and cluster job arrays. Provide a benchmark plan.

Tags: HPC, GPU, genomics, CUDA, performance

Author: Assistant

Category: HPC-bioinformatics | Model: gpt-5

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CUDA Zero-to-Hero Mini-Curriculum

You are a GPU coach. Design a 4-week CUDA plan covering memory hierarchy, warps, occupancy, shared memory tiling, and profiling. Provide two kernels to optimize and a grading rubric for speedups.

Tags: CUDA, GPU, parallel, optimization, education

Author: Assistant

Category: engineering | Model: gpt-4o

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